iBio Tools v5.0 by Chris Lou
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Geneinfo
Input your gene
Geneinfo
qPCRcal Online
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Name of Control Group
Name of Reference Gene Name
Statistical Method
t.test
wilcox.test
y_lims
breaks
signif.height
Colors Palettes for You
Colors1
Colors2
Colors3
Segment1
Segment2
Segment3
Segment4
Segment1_Start
Segment2_Start
Segment3_Start
Segment4_Start
Segment1_End
Segment2_End
Segment3_End
Segment4_End
Segment1_break
Segment2_break
Segment3_break
Segment4_break
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InputTable
Barplot
Statistics
Gene Function Prediction
Input your gene
TCGA-TumorID
Thyroid carcinoma
Cervical squamous cell carcinoma and endocervical adenocarcinoma
Sarcoma
Rectum adenocarcinoma
Liver hepatocellular carcinoma
Kidney Chromophobe
Thymoma
Sarcoma
Stomach adenocarcinoma
Lung squamous cell carcinoma
Pancreatic adenocarcinoma
Bladder Urothelial Carcinoma
Head and Neck squamous cell carcinoma
Kidney renal clear cell carcinoma
Glioblastoma multiforme
Skin Cutaneous Melanoma
Cholangio carcinoma
Uterine Corpus Endometrial Carcinoma
Esophageal carcinoma
Colon adenocarcinoma
Breast invasive carcinoma
Prostate adenocarcinoma
Lung adenocarcinoma
Kidney renal papillary cell carcinoma
Pheochromocytoma and Paraganglioma
Brain Lower Grade Glioma
Adrenocortical carcinoma
Mesothelioma
Ovarian serous cystadenocarcinoma
Acute Myeloid Leukemia
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma
Uveal Melanoma
Testicular Germ Cell Tumors
Uterine Carcinosarcoma
Cutoff of FoldChange
Cutoff of Padj
Input Number of Xlim
ColorsPal
Classic
ChrisLike1
ChrisLike2
ChrisLike3
YouLike
GroupType
Median
Quartile
Select Geneset?
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Gene Expression in PanCancer tissues
Input your gene
PanCancer
GTEx
AnnoE Online
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Column Name of Target
ID Type
ID(ENSG)
SYMBOL
EntrezID
EntrezID
FilterLnc
Download
Data Table
Annotation Output
GSEA
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Column Name of Gene ID(ENSGxxxx).IF rownames,Input X
Need Annotate?
Column Name of FoldChange
Column Name of Padj
Column Name of Gene Symbol
ColorsPal
Colors1
Colors2
Colors3
MSigDB ID
h
c2
c3
c4
c5
c6
c7
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RNKfile
DownloadTable
DownloadPlotPdf
Volcano Online
FromTCGADEGdata
TCGA-TumorID
Thyroid carcinoma
Cervical squamous cell carcinoma and endocervical adenocarcinoma
Sarcoma
Rectum adenocarcinoma
Liver hepatocellular carcinoma
Kidney Chromophobe
Thymoma
Sarcoma
Stomach adenocarcinoma
Lung squamous cell carcinoma
Pancreatic adenocarcinoma
Bladder Urothelial Carcinoma
Head and Neck squamous cell carcinoma
Kidney renal clear cell carcinoma
Glioblastoma multiforme
Skin Cutaneous Melanoma
Cholangio carcinoma
Uterine Corpus Endometrial Carcinoma
Esophageal carcinoma
Colon adenocarcinoma
Breast invasive carcinoma
Prostate adenocarcinoma
Lung adenocarcinoma
Kidney renal papillary cell carcinoma
Pheochromocytoma and Paraganglioma
Choose Your Files
Browse...
Project Name
Need Annotate?
Column Name of Gene ID(ENSGxxxx).IF rownames,Input X
EntrezID
FilterLnc
Column Name of FoldChange
Column Name of Padj
Column Name of Gene Symbol
Cutoff of Foldchange
Cutoff of Padj
Input Number of Xlim
Input Number of Ylim
ColorsPal
Classic
ChrisLike1
ChrisLike2
ChrisLike3
YouLike
Select colour
Select colour
Select colour
Select Gene?
Clear Rows
DownloadTable
DownloadPlotPdf
Survival & ROC Plot Based on AUC
Thanks,Daying!
FromTCGASurdata
TCGA-TumorID
Thyroid carcinoma
Cervical squamous cell carcinoma and endocervical adenocarcinoma
Sarcoma
Rectum adenocarcinoma
Liver hepatocellular carcinoma
Kidney Chromophobe
Thymoma
Sarcoma
Stomach adenocarcinoma
Lung squamous cell carcinoma
Pancreatic adenocarcinoma
Bladder Urothelial Carcinoma
Head and Neck squamous cell carcinoma
Kidney renal clear cell carcinoma
Glioblastoma multiforme
Skin Cutaneous Melanoma
Cholangio carcinoma
Uterine Corpus Endometrial Carcinoma
Esophageal carcinoma
Colon adenocarcinoma
Breast invasive carcinoma
Prostate adenocarcinoma
Lung adenocarcinoma
Kidney renal papillary cell carcinoma
Pheochromocytoma and Paraganglioma
Brain Lower Grade Glioma
Adrenocortical carcinoma
Mesothelioma
Ovarian serous cystadenocarcinoma
Acute Myeloid Leukemia
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma
Uveal Melanoma
Testicular Germ Cell Tumors
Uterine Carcinosarcoma
FilterLnc
Choose Your Files
Browse...
Column Name of times
Column Name of status
Colors Palettes for You
Colors1
Colors2
Colors3
ROC_Plot
Clear Rows